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Click on a title to see an article's PubMed abstract (where available) or a book's description from its publisher (where available).
104. Smith T.F., Gutell R., Lee J., and Hartman H. (2008). The origin and evolution of the ribosome. Biology Direct, 3:16.
103. Chandramouli P., Topf M., Ménétret J.-F., Eswar N., Cannone J.J., Gutell R.R., Sali A., and Akey C.W. (2008). Structure of the Mammalian 80S Ribosome at 8.7 Ĺ Resolution. Structure, 16:535-548.
102. Wang S., Gutell R.R., and Miranker D.P. (2007). Biclustering as a Method for RNA Local Multiple Sequence Alignment. Bioinformatics, 23:3289-3296.
101. Lee C.-Y., Lee J.C., and Gutell R.R. (2007). Networks of interactions in the secondary and tertiary structure of ribosomal RNA. Physica A, 386:564-572.
100. Gillespie J.J., Johnston J.S., Cannone J.J., and Gutell R.R. (2006).
Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S)
rRNA genes of Apis mellifera (Insecta:Hymenoptera): structure, organization, and
retrotransposable elements.
Insect Molecular Biology, 15:657-686.
99. Weinstock et al. (81 authors), Gillespie J.J., Cannone J.J., Gutell R.R., et al. (100 authors) (2006).
Insights into social insects from the genome of the honey bee Apis mellifera.
Nature, 443:931-949.
98. Lee J.C., Gutell R.R., and Russell R. (2006).
The UAA/GAN internal loop motif: a new RNA structural element that forms a cross-strand AAA stack and long-range tertiary interactions.
Journal of Molecular Biology, 360:978-988.
97. Alverson A.J., Cannone J., Gutell R.R., and Theriot E.C. (2006).
The Evolution of Elongate Shape in Diatoms. Journal of Phycology, 42:655-668.
96. Mears J.A., Sharma M.R., Gutell R.R., McCook A.S., Richardson P.E., Caulfield T.R., Agrawal R.K., and Harvey S.C. (2006).
A Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome.
Journal of Molecular Biology, 358: 193-212.
95. Gillespie J.J., McKenna C.H., Yoder M.J., Gutell R.R., Johnston J.S., Kathirithamby J., and Cognato A.I. (2005).
Assessing the Odd Secondary Structural Properties of Nuclear Small Subunit Ribosomal RNA
Sequences (18S) of the Twisted-Wing Parasites (Insecta: Strepsiptera).
Insect Molecular Biology, 14:625-643.
94. Qiu Y.-L., Dombrovska O., Lee J., Li L., Whitlock B.A., Bernasconi-Quadroni F., Rest J.S.,
Davis C.C., Borsch T., Hilu K.W., Renner S.S., Soltis D.E., Soltis P.S., Zanis M.J., Cannone J.J.,
Gutell R.R., Powell M., Savolainen V., Chatrou L.W., and Chase M.W. (2005).
Phylogenetic Analyses of Basal Angiosperms Based on Nine Plastid, Mitochondrial, and Nuclear Genes.
International Journal of Plant Sciences, 166:815-842.
93. Müller K.M., Ellenor D.W., Sherwood A.R., Sheath R.G., Cannone J.J., and Gutell R.R. (2005).
Evidence for Lateral Transfer of an IE Intron Between Fungal and Red Algal Small Subunit rRNA Genes.
Journal of Phycology, 41:380-390.
92. Lee J.C. and Gutell R.R. (2004).
Diversity of Base-pair Conformations and their Occurrence in
rRNA Structure and RNA Structural Motifs.
Journal of Molecular Biology, 344:1225-1249.
91. Gillespie J., Cannone J., Gutell R., and Cognato A. (2004).
A secondary structural model of the 28S rRNA expansion segments
D2 and D3 from rootworms and related leaf beetles (Coleoptera: Chrysomelidae;
Galerucinae).
Insect Molecular Biology, 13:495-518.
90. Doshi K.J., Cannone J.J., Cobaugh C.W., and Gutell R.R. (2004).
Evaluation of the suitability of free-energy minimization using
nearest-neighbor energy parameters for RNA secondary structure prediction.
BioMed Central Bioinformatics, 5:105.
89. Cannone J.J. and Gutell R.R. (2004).
Multiple entries in:
Dictionary of Bioinformatics and Computational Biology, Hancock J.M.
and Zvelebil M.J. (eds.). Wiley. Hoboken, New Jersey.
88. Hewitt E.A., Müller K.M., Cannone J., Hogan D.J., Gutell R., and Prescott D.M. (2003).
Phylogenetic Relationships Among 28 Spirotrichous Ciliates
Defined by rDNA.
Molecular Phylogenetics and Evolution, 29:258-267.
87. Goertzen L.R., Cannone J.J., Gutell R.R., and Jansen R.K. (2003).
ITS Secondary Structure Derived from Comparative Analysis:
Implications for Sequence Alignment and Phylogeny of the Asteraceae.
Molecular Phylogenetics and Evolution, 29:216-234.
86. Bhattacharya D, Simon D., Huang J., Cannone J.J., and Gutell R.R. (2003).
The Exon Context and Distribution of Euascomycetes rRNA
Spliceosomal Introns.
BioMed Central Evolutionary Biology. 3:7.
85. Lee J.C., Cannone J.J., and Gutell R.R. (2003).
The Lonepair Triloop: A New Motif in RNA Structure.
Journal of Molecular Biology, 325:65-83.
84. Jackson S.A., Cannone J.J., Lee J.C., Gutell R.R., and Woodson S.A. (2002).
Distribution of rRNA Introns in the Three-Dimensional
Structure of the Ribosome.
Journal of Molecular Biology, 323:35-52.
83. Mears J.A., Cannone J.J., Stagg S.M., Gutell R.R., Agrawal R.K., and Harvey S.C. (2002).
Modeling a Minimal Ribosome Based on Comparative Sequence
Analysis.
Journal of Molecular Biology, 321:215-234.
82. Muller K.M., Sherwood A.R., Pueschel C.M., Gutell R.R., and Sheath R.G. (2002).
A proposal for a new red algal order, the Thoreales.
Journal of Phycology, 38:807-820.
81. Gutell R.R., Lee J.C., and Cannone J.J. (2002).
The Accuracy of Ribosomal RNA Comparative Structure Models.
Current Opinion in Structural Biology, 12:301-310.
80. Cannone J.J, Subramanian S., Schnare M.N., Collett J.R., D'Souza L.M., Du Y.,
Feng B., Lin N., Madabusi L.V., Müller K.M., Pande N., Shang Z., Yu N., and
Gutell R.R. (2002).
The Comparative RNA Web (CRW) Site: An Online Database of
Comparative Sequence and Structure Information for Ribosomal, Intron, and Other
RNAs.
BioMed Central Bioinformatics. 3:2.
[Correction:
BioMed Central Bioinformatics. 3:15.]
79. Macke T.J., Ecker D.J., Gutell R.R., Gautheret D., Case D.A., and Sampath R. (2001).
RNAMotif, an RNA secondary structure definition and search
algorithm.
Nucleic Acids Research. 29:4724-4735.
78. Vernon D., Gutell R.R., Cannone J.J., Rumpf R.W., and Birky C.W. Jr. (2001).
Accelerated Evolution of Functional Plastid rRNA and Elongation
Factor Genes Due to Reduced Protein Synthetic Load After the Loss of Photosynthesis
in the Chlorophyte Alga Polytoma.
Molecular Biology and Evolution. 18(9):1810-1822.
77. Muller K.M., Cannone J.J., Gutell R.R., and Sheath R.G. (2001).
A structural and phylogenetic analysis of the Group IC1 introns
in the order Bangiales (Rhodophyta).
Molecular Biology and Evolution. 18(9):1654-1667.
76. Bhattacharya D., Cannone J.J., and Gutell R.R. (2001).
Group I Intron Lateral Transfer Between Red and Brown Algae
Ribosomal RNA.
Current Genetics. 40:82-90.
75. Elgavish T., Cannone J.J., Lee J.C., Harvey S.C., and Gutell R.R. (2001).
AA.AG@Helix.Ends: A:A and A:G Base-pairs at the Ends of 16 S
and 23 S rRNA Helices.
Journal of Molecular Biology. 310:735-753.
74. Gutell R.R., Cannone J.J., Shang Z., Du Y., and Serra M.J. (2000).
A Story: Unpaired Adenosine Bases in Ribosomal RNA.
Journal of Molecular Biology. 304:335-354.
73. Ragan M.A., MacCallum G.S., Murphy C.A., Cannone J.J., Gutell R.R., and
McGladdery S.E. (2000).
Protistan parasite QPX of hard-shell clam Mercenaria
mercenaria is a member of Labyrinthulomycota.
Diseases of Aquatic Organisms. 42:185-190.
72. Chen X., Gutell R.R., and Lambowitz A.M. (2000).
Function of Tyrosyl-tRNA Synthetase in Splicing Group I
Introns: An Induced-fit Model for Binding to the P4-P6 Domain Based on Analysis
of Mutations at the Junction of the P4-P6 Stacked Helices.
Journal of Molecular Biology. 301:265-283.
71. Gutell R.R., Cannone J.J., Konings D., and Gautheret D. (2000).
Predicting U-turns in Ribosomal RNA with Comparative Sequence
Analysis.
Journal of Molecular Biology. 300:791-803.
70. Rand T.G., White K., Cannone J.J., Gutell R.R., Murphy C.A., and Ragan M.A. (2000).
Ichthyophonus irregularis sp. nov. from the yellowtail
flounder Limanda ferruginea from the Nova Scotia shelf.
Diseases of Aquatic Organisms. 41:31-36.
69. Lydeard C., Holznagel W.E., Schnare M.N., and Gutell R.R. (2000).
Phylogenetic Analysis of Molluscan Mitochondrial LSU rDNA
Sequences and Secondary Structures.
Molecular Phylogenetics and Evolution 15:83-102.
68. Babin P., Dolan M., Wollenzien P., and Gutell R.R. (1999).
Identity and geometry of a base triple in 16S rRNA determined
by comparative sequence analysis and molecular modeling.
RNA 5:1430-1439.
67. Gutell R.R. (1999).
Comparative Analysis of RNA Sequences. Symposium on RNA Biology - North Carolina (October
1999).
Nucleic Acids Research Symposia Series 41:48-53.
66. Conn G.L., Gutell R.R., and Draper D.E. (1998).
A Functional Ribosomal RNA Tertiary Structure Involves a Base
Triple Interaction.
Biochemistry 37:11980-11988.
65. Ortoleva-Donnelly L., Szewczak A.A., Gutell R.R., and Strobel S.A. (1998).
The Chemical Basis of Adenosine Conservation throughout the
Tetrahymena Ribozyme.
RNA 4:498-519.
64. Tanner M.A., Anderson E.M., Gutell R.R., and Cech T.R. (1997).
Mutagenesis and comparative sequence analysis of a base triple
joining the two domains of group I ribozymes.
RNA 3:1037-1051.
63. Li J., Gutell R.R., Damberger S.H., Kissinger J.C., Rogers M.J., Wirtz R.A.,
Sattabongkot J., and McCutchan T. (1997).
Regulation and trafficking of three distinct 18 S ribosomal
RNAs during development of the malaria parasite.
Journal of Molecular Biology 269:203-213.
62. Huynen M., Gutell R.R. and Konings D. (1997)
Assessing the reliability of RNA folding using statistical
mechanics.
Journal of Molecular Biology 267(5):1104-1112.
61. Gautheret D. and Gutell R.R. (1997)
Inferring the Conformation of RNA Base Pairs and Triples
from Patterns of Sequence Variation.
Nucleic Acids Research 25:1559-1564.
60. Gutell R.R. and Damberger S.H. (1996).
Comparative Sequence Analysis of Experiments Performed During Evolution.
in: Ribosomal RNA and Group I Introns. pp. 15-33. Green R., and Schroeder R. eds.
R.G. Landes Company, Austin, Texas.
59. Fields D.S. and Gutell R.R. (1996)
An Analysis of Large rRNA Sequences Folded by a Thermodynamic
Method.
Folding and Design 1(6):419-430.
58. Ragan M.A., Goggin C.L., Cawthorn R.J., Cerenius L., Jamieson A.V.C., Plourde S.M.,
Rand T.G., Soederhaell K., and Gutell R.R. (1996)
A novel clade of protistan parasites near the animal-fungal
divergence.
Proceedings of the National Academy of Sciences (USA) 93:11907-11912.
57. Picon, M., Gutell R.R., Ehrlich R., Zaha A. (1996)
Characterization of a flatworm ribosomal RNA-encoding gene:
promoter sequence and small subunit rRNA secondary structure.
Gene 171:215-220.
56. Buchheim M.A., Lemieux C., Otis C., Gutell R.R., Chapman R.L., and Turmel M. (1996)
Phylogeny of the Chlamydomonales (Chlorophyceae): A comparison
of ribosomal RNA gene sequences from the nucleus and the chloroplast.
Molecular Phylogenetics and Evolution 5:391-402.
55. Rogers M.J., Gutell R.R., Damberger S.H., Li J., McConkey G.A., Waters A.P., and
McCutchan T. (1996)
Structural features of the large subunit rRNA expressed in
Plasmodium falciparum sporozoites that distinguish it from the asexually
expressed large subunit rRNA.
RNA 2:134-145.
54. Schnare M.N., Damberger S.H., Gray M.W., and Gutell R.R. (1996)
Comprehensive Comparison of Structural Characteristics in
Eukaryotic Cytoplasmic Large Subunit (23S-like) Ribosomal RNA.
Journal of Molecular Biology 256:701-719.
53. Gutell R.R. (1996).
Comparative Sequence Analysis and the Structure of 16S and 23S rRNA.
In: Ribosomal RNA. Structure, Evolution, Processing, and Function in Protein
Biosynthesis. pp. 111-128. Dahlberg A.E. and Zimmermann R.A.. (eds.)
CRC Press. Boca Raton.
52. Turmel M., Boudreau E., Gutell R.R., Otis C., and Lemieux C. (1995).
Chloroplast gene organization and phylogenetic relationships in green algae.
Plant Genome and Plastome: Their Structure and Evolution. ed. Tsunewaki K. pp. 147-156.
51. Gautheret D., Konings D., and Gutell R.R. (1995).
GU Base pairing Motifs in Ribosomal RNAs.
RNA 1:807-814.
50. Lodmell J.S., Gutell R.R., and Dahlberg A.E. (1995).
Genetic and comparative analyses reveal an alternative secondary
structure in the region of nt 912 of 16S ribosomal RNA.
Proceedings of the National Academy of Sciences (USA) 92:10555-10559.
49. Kim N.W., Gutell R.R., and Chan V.L. (1995)
Complete sequences and organization of the rrnA operon from
Campylobacter jejuni TGH9011 (ATCC 43431).
Gene 164:101-106.
48. Ragan M.A. and Gutell R.R. (1995).
Are red algae plants?
Botanical Journal of the Linnean Society 118:81-105.
47. Fan M., Chen L-C., Ragan M.A., Gutell R.R., Warner J.R., Currie B.P., and
Casadevall A. (1995)
The 5S rRNA and the rRNA intergenic spacer of the two varieties
of Cryptococcus neoformans.
Journal of Medical and Veterinary Mycology 33:215-221.
46. Konings D.A.M. and Gutell R.R. (1995)
A comparison of thermodynamic foldings with comparatively
derived structures of 16S and 16S-like rRNAs.
RNA 1(6):559-574.
45. Oliveira M.C., Kurniawan J., Bird C.J., Rice E.L., Murphy C.A., Singh R.K.,
Gutell R.R., and Ragan M.A. (1995).
A preliminary investigation of the order Bangiales (Bangiophycidae, Rhodophyta) based on
sequences of nuclear small-subunit ribosomal RNA genes.
Phycological Research 43(2):71-79.
44. Gautheret D., Damberger S.H., and Gutell R.R. (1995).
Identification of Base Triples in RNA Using Comparative Sequence
Analysis.
Journal of Molecular Biology 248:27-43.
43. Srikantha T., Gutell R.R., Morrow B., and Soll D.R. (1994).
Partial nucleotide sequence of a single ribosomal RNA coding
region and secondary structure of the large subunit 25S rRNA of
Candida albicans.
Current Genetics 26:321-328.
42. Damberger S.H. and Gutell R.R. (1994).
A Comparative Database of Group I Intron Structures.
Nucleic Acids Research 22:3508-3510.
41. Gutell R.R. (1994)
Collection of Small Subunit (16S- and 16S-like) ribosomal RNA
structures: 1994.
Nucleic Acids Research 22:3502-3507.
40. Gautheret D., Konings D., and Gutell R.R. (1994).
A Major Family of Motifs Involving G-A Mismatches in Ribosomal
RNA.
Journal of Molecular Biology 242:1-8.
39. Bird C.J., Ragan M.A., Critchley A.T., Rice E.L., and Gutell R.R. (1994).
Molecular relationships among the Gracilariaceae (Rhodophyta): further observations on
some undetermined species.
European Journal of Phycology. 29:195-202.
38. Fan M., Currie B.P., Gutell R.R., Ragan M.A., and Casadevall A. (1994).
The 16S-like, 5.8S, and 23S-like rRNA of the two varieties of
Cryptococcus neoformans: Sequence, Secondary Structure, Phylogenetic
Analysis, and restriction fragment polymorphisms.
Journal of Medical and Veterinary Mycology 32:163-180.
37. Trust T.J., Logan S.M., Gustafson C., Romaniuk P.J., Kim N.W., Chan V.L., Ragan M.A.,
Guerry P., and Gutell R.R. (1994).
Phylogenetic and molecular characterization of a 23S ribosomal
RNA gene positions the Genus Campylobacter in the epsilon subdivision of
the Proteobacteria and shows that the presence of transcribed spacers is common
in Campylobacter spp.
Journal of Bacteriology 176:4597-4609.
36. Ragan M.A., Bird C.J., Rice E.L., Gutell R.R., Murphy C.A., and Singh R.K. (1994).
A molecular phylogeny of the marine red algae (Rhodophyta) based
on the nuclear small-subunit rRNA gene.
Proceedings of the National Academy of Sciences (USA) 91:7276-7280.
35. Cech T.R., Damberger S.H., and Gutell R.R. (1994).
Representation of the Secondary and Tertiary Structure of
Group I Introns.
Nature Structural Biology 1:273-280.
34. Gutell R.R., Larsen N., and Woese C.R. (1994)
Lessons from an Evolving Ribosomal RNA: 16S and 23S rRNA
Structure from a Comparative Perspective.
Microbiological Reviews 58:10-26.
33. Gutell R.R. (1993).
The Simplicity Behind the Elucidation of Complex Structure in Ribosomal RNA.
in: The Translational Apparatus, Nierhaus K.H., Subramanian A.R., Erdmann V.A.,
Franceschi F., and Wittman-Liebold B. (eds). pp. 477-488. Plenum Publishing
Corporation. New York, New York.
32. Ree H.K., Larsen N., Gutell R.R., and Zimmermann R.A. (1993).
The Primary and Secondary Structures of the 23S Ribosomal RNA from Thermoplasma
acidophilum define an Ancient Archaeal Divergence.
Systematic and Applied Microbiology 16:333-341.
31. Turmel M., Gutell R.R., Mercier J-P., Otis C., and Lemieux C. (1993)
Analysis of the Chloroplast Large Subunit Ribosomal RNA Gene
from 17 Chlamydomonas Taxa. Three Internal Transcribed Spacers and 12 Group I
Intron Insertion Sites.
Journal of Molecular Biology 232:446-467.
30. Gutell R.R. (1993)
Collection of Small Subunit (16S- and 16S-like) ribosomal
RNA structures.
Nucleic Acids Research 21:3051-3054.
29. Gutell R.R., Gray M.W., and Schnare M.N. (1993).
A compilation of large subunit (23S- and 23S-like) ribosomal
RNA structures: 1993.
Nucleic Acids Research 21(13):3055-3074.
28. Gutell R.R. (1993).
COMPARATIVE STUDIES OF RNA: Inferring Higher-Order Structure from Patterns of Sequence
Variation.
Current Opinion in Structural Biology 3:313-322.
27. van Keulen H., Gutell R.R., Gates M.A., Campbell S.R., Erlandsen S.L., Jarroll E.L.,
Kulda J., and Meyer E.A. (1993).
Unique phylogenetic position of Diplomonadida based on the
complete small subunit ribosomal RNA sequence of Giardia ardeae,
G.muris, G.duodenalis and Hexamita sp.
FASEB J. 7:223-231.
26. Gutell R.R. (1992).
Evolutionary Characteristics of 16S and 23S rRNA Structures.
pp. 243-309. PRESENTED AT: The Symposium -- The Origin and Evolution of Prokaryotic and
Eukaryotic Cells. Shimoda, Japan. April 22-25, 1992. Hyman Hartman and Koichiro
Matsuno (eds.). World Scientific Publishing Co., New Jersey. USA.
25. Gutell R.R., Power A., Hertz G., Putz E., and Stormo G. (1992)
Identifying Constraints on the Higher-Order Structure of RNA:
Continued Development and Application of Comparative Sequence Analysis Methods.
Nucleic Acids Research 20:5785-5795.
24. van Keulen H., Gutell R.R., Campbell S.R., Erlandsen S.L, and Jarroll E.L. (1992).
The nucleotide sequence of the entire ribosomal DNA operon and
the structure of the large subunit rRNA of Giardia muris.
Journal of Molecular Evolution 35:318-328.
23. Gutell R.R., Schnare M.N., and Gray M.W. (1992)
A compilation of large subunit (23S and 23S-like) ribosomal
RNA structures.
Nucleic Acids Research 20(Supplement):2095-2109.
22. Chakrabarti D., Dame J.B., Gutell R.R., and Yowell C.A. (1992).
Characterization of the rDNA unit and sequence analysis of the
Small Subunit rRNA and 5.8S rRNA genes from Tritrichomonas foetus.
Molecular and Biochemical Parasitology 52:75-84.
21. Pan T., Gutell R.R., and Uhlenbeck O. (1991).
Folding of Circularly Permuted Transfer RNAs.
Science 254:1361-1364.
20. Woese C.R., Winker S. and Gutell R.R. (1990)
Architecture of Ribosomal RNA: Constraints on the sequence of
Tetra-loops.
Proceedings of the National Academy of Sciences (USA) 87:8467-8471.
19. Gutell R.R., Schnare M., and Gray M. (1990)
A compilation of large subunit (23S-like) ribosomal RNA
sequences presented in a secondary structure format.
Nucleic Acids Research 18(Supplement):2319-2330.
18. Gutell, R.R. and C.R. Woese (1990)
Higher order structural elements in ribosomal RNAs:
Pseudo-knots and the use of non-canonical pairs.
Proceedings of the National Academy of Sciences (USA) 87(2):663-667.
17. Haselman T., Gutell R.R., Jurka J., and Fox G.E. (1989)
Additional Watson-Crick interactions suggest a structural
core in large subunit rRNA.
Journal of Biomolecular Structure and Dynamics 7:181-186.
16. Woese C.R. and Gutell R.R. (1989)
Evidence for several higher order structural elements in
ribosomal RNA.
Proceedings of the National Academy of Sciences (USA) 86:3119-3122.
15. Gutell R.R. and Fox G.E. (1988).
A compilation of large subunit RNA sequences presented in a
structural format.
Nucleic Acids Research 16(supplement):r175-r269.
14. Gutell R.R., Noller H.F., and Woese C.R. (1986).
Higher order structure in ribosomal RNA.
The EMBO Journal 5(5):1111-1113.
13. Noller H.F., Van Stolk B.J., Moazed D., Douthwaite S., and Gutell R.R.(1985).
Studies on the structure and function of 16S ribosomal RNA using structure-specific
chemical probes.
Proc. Int. Symp. Biomol. Struct. Interactions, Suppl. J. Biosci. 8:747-755.
12. Gutell R.R., Weiser B., Woese C.R., and Noller H.F. (1985).
Comparative anatomy of 16S-like ribosomal RNA.
Progress in Nucleic Acid Research and Molecular Biology 32:155-216.
11. Sloof P., Van den Burg J., Voogd A., Benne R., Agostinellia M., Borst P., Gutell R.,
and Noller H. (1985).
Further characterization of the extremely small mitochondrial
RNAs from trypanosomes: a detailed comparison of the 9S and 12S RNAs from
Crithidia fasciculata and Trypanosoma brucei with rRNAs from other
organisms.
Nucleic Acids Research 13:4171-4190.
10. Seilhamer J.J., Gutell R.R., and Cummings D.J. (1984).
Paramecium mitochondrial genes: II.large subunit rRNA gene
sequence and microevolution.
Journal of Biological Chemistry 259:5173-5181.
9. Hogan J.J., Gutell R.R., and Noller H.F. (1984).
Probing the conformation of 26S rRNA in yeast 60S ribosomal
subunits with kethoxal.
Biochemistry 23:3330-3335.
8. Hogan J.J., Gutell R.R., and Noller H.F. (1984).
Probing the conformation of 18S rRNA in yeast 40S ribosomal
subunits with kethoxal.
Biochemistry 23:3322-3330.
7. Chan Y.-L., Gutell R., Noller H.F., and Wool I.G. (1984).
The nucleotide sequence of a rat 18S ribosomal ribonucleic
acid gene and a proposal for the secondary structure of 18S ribosomal
ribonucleic acid.
Journal of Biological Chemistry 259:224-230.
6. Prince J.B., Gutell R.R., and Garrett R.A. (1983).
A consensus model of the Escherichia coli ribosome.
Trends in Biochemical Sciences 8:359-363.
5. Woese C.R., Gutell R., Gupta R., and Noller H.F. (1983).
Detailed analysis of the higher-order structure of 16S-like
ribosomal ribonucleic acids.
Microbiological Reviews 47(4):621-669.
4. Brosius J., Ullrich A., Raker M.A., Gray A., Dull T.J., Gutell R.R., and Noller
H.F. (1981).
Construction and fine mapping of recombinant plasmids containing
the rrnB ribosomal RNA operon of E.coli.
Plasmid 6:112-118.
3. Kingston, R.E., Gutell R.R., Taylor A.R., and Chamberlin M.J. (1981).
Transcriptional mapping of plasmid pKK3535, quantitation of the
effect of guanosine tetraphosphate on binding to the rrnB promotors and a lambda
promotor with sequence homologies to the CII binding region.
Journal of Molecular Biology 146:433-449.
2. Noller H.F., Kop J., Wheaton V., Brosius J., Gutell R.R., Kopylov A.M., Dohme F.,
Herr W., Stahl D.A., Gupta R., and Woese C.R. (1981).
Secondary structure model for 23S ribosomal RNA.
Nucleic Acids Research 9(22):6167-6189.
1. Woese C.R., Magrum L.J., Gupta R., Siegel R.B., Stahl D.A., Kop J., Crawford N.,
Brosius J., Gutell R., Hogan J.J., and Noller H.F. (1980)
Secondary structure model for bacterial 16S ribosomal RNA:
phylogenetic, enzymatic and chemical evidence.
Nucleic Acids Research 8:2275-2293.